Search results for "hidden Markov model"
showing 10 items of 76 documents
The gypsy database (GyDB) of mobile genetic elements: release 2.0
2011
This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…
Coupled conditional backward sampling particle filter
2020
The conditional particle filter (CPF) is a promising algorithm for general hidden Markov model smoothing. Empirical evidence suggests that the variant of CPF with backward sampling (CBPF) performs well even with long time series. Previous theoretical results have not been able to demonstrate the improvement brought by backward sampling, whereas we provide rates showing that CBPF can remain effective with a fixed number of particles independent of the time horizon. Our result is based on analysis of a new coupling of two CBPFs, the coupled conditional backward sampling particle filter (CCBPF). We show that CCBPF has good stability properties in the sense that with fixed number of particles, …
A context-aware approach for long-term behavioural change detection and abnormality prediction in ambient assisted living
2015
This research aims to describe pattern recognition models for detecting behavioural and health-related changes in a patient who is monitored continuously in an assisted living environment. The early anticipation of anomalies can improve the rate of disease prevention. Here we present different learning techniques for predicting abnormalities and behavioural trends in various user contexts. In this paper we described a Hidden Markov Model based approach for detecting abnormalities in daily activities, a process of identifying irregularity in routine behaviours from statistical histories and an exponential smoothing technique to predict future changes in various vital signs. The outcomes of t…
Motion sensors for activity recognition in an ambient-intelligence scenario
2013
In recent years, Ambient Intelligence (AmI) has attracted a number of researchers due to the widespread diffusion of unobtrusive sensing devices. The availability of such a great amount of acquired data has driven the interest of the scientific community in producing novel methods for combining raw measurements in order to understand what is happening in the monitored scenario. Moreover, due the primary role of the end user, an additional requirement of any AmI system is to maintain a high level of pervasiveness. In this paper we propose a method for recognizing human activities by means of a time of flight (ToF) depth and RGB camera device, namely Microsoft Kinect. The proposed approach is…
A Study of Perceptron Mapping Capability to Design Speech Event Detectors
2006
Event detection is a fundamental yet critical component in automatic speech recognition (ASR) systems that attempt to extract knowledge-based features at the front-end level. In this context, it is common practice to design the detectors inside well-known frameworks based on artificial neural network (ANN) or support vector machine (SVM). In the case of ANN, speech scientists often design their detector architecture relying on conventional feed-forward multi-layer perceptron (MLP) with sigmoidal activation function. The aim of this paper is to introduce other ANN architectures inside the context of detection-based ASR. In particular, a bank of feed-forward MLPs using sinusoidal activation f…
Textual data compression in computational biology: Algorithmic techniques
2012
Abstract In a recent review [R. Giancarlo, D. Scaturro, F. Utro, Textual data compression in computational biology: a synopsis, Bioinformatics 25 (2009) 1575–1586] the first systematic organization and presentation of the impact of textual data compression for the analysis of biological data has been given. Its main focus was on a systematic presentation of the key areas of bioinformatics and computational biology where compression has been used together with a technical presentation of how well-known notions from information theory have been adapted to successfully work on biological data. Rather surprisingly, the use of data compression is pervasive in computational biology. Starting from…
Dynamic Community Detection for Brain Functional Networks during Music Listening with Block Component Analysis
2023
Publisher Copyright: Author The human brain can be described as a complex network of functional connections between distinct regions, referred to as the brain functional network. Recent studies show that the functional network is a dynamic process and its community structure evolves with time during continuous task performance. Consequently, it is important for the understanding of the human brain to develop dynamic community detection techniques for such time-varying functional networks. Here, we propose a temporal clustering framework based on a set of network generative models and surprisingly it can be linked to Block Component Analysis to detect and track the latent community structure…
Creation and cognition for humanoid live dancing
2016
Abstract Computational creativity in dancing is a recent and challenging research field in Artificial Intelligence and Robotics. We present a cognitive architecture embodied in a humanoid robot capable to create and perform dances driven by the perception of music. The humanoid robot is able to suitably move, to react to human mate dancers and to generate novel and appropriate sequences of movements. The approach is based on a cognitive architecture that integrates Hidden Markov Models and Genetic Algorithms. The system has been implemented on a NAO robot and tested in public setting-up live performances, obtaining positive feedbacks from the audience.
An automatic system for humanoid dance creation
2016
Abstract The paper describes a novel approach to allow a robot to dance following musical rhythm. The proposed system generates a dance for a humanoid robot through the combination of basic movements synchronized with the music. The system made up of three parts: the extraction of features from audio file, estimation of movements through the Hidden Markov Models and, finally, the generation of dance. Starting from a set of given movements, the robot choices sequence of movements a suitable Hidden Markov Model, and synchronize them processing musical input. The proposed approach has the advantage that movement execution probabilities could be changed according evaluation of the dance executi…
Part of Speech Tagging Using Hidden Markov Models
2020
Abstract In this paper, we present a wide range of models based on less adaptive and adaptive approaches for a PoS tagging system. These parameters for the adaptive approach are based on the n-gram of the Hidden Markov Model, evaluated for bigram and trigram, and based on three different types of decoding method, in this case forward, backward, and bidirectional. We used the Brown Corpus for the training and the testing phase. The bidirectional trigram model almost reaches state of the art accuracy but is disadvantaged by the decoding speed time while the backward trigram reaches almost the same results with a way better decoding speed time. By these results, we can conclude that the decodi…